Fusing similarity rankings in ligand-based virtual screening

Comput Struct Biotechnol J. 2013 Feb 24:5:e201302002. doi: 10.5936/csbj.201302002. eCollection 2013.

Abstract

Data fusion is the name given to a range of methods for combining multiple sources of evidence. This mini-review summarizes the use of one such class of methods for combining the rankings obtained when similarity searching is used for ligand-based virtual screening. Two main approaches are described: similarity fusion involves combining rankings from single searches based on multiple similarity measures; and group fusion involves combining rankings from multiple searches based on a single similarity measure. The review then focuses on the rules that are available for combining similarity rankings, and on the evidence that exists for the superiority of fusion-based methods over conventional similarity searching.

Keywords: Combination methods; Ranking methods; Similarity measures; Similarity searching; Virtual screening.

Publication types

  • Review