The complete mitochondrial genome of Haliotis laevigata (Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing

Nick A Robinson; Nathan E Hall; Elizabeth M Ross; Ira R Cooke; Brett P Shiel; Andrew J Robinson; Jan M Strugnell

doi:10.3109/19401736.2014.900611

The complete mitochondrial genome of Haliotis laevigata (Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):437-8. doi: 10.3109/19401736.2014.900611. Epub 2014 Mar 24.

Authors

Nick A Robinson^{1

2}, Nathan E Hall^{3

4}, Elizabeth M Ross⁵, Ira R Cooke^{4

6}, Brett P Shiel³, Andrew J Robinson^{4

6}, Jan M Strugnell³

Affiliations

¹ a Department of Breeding and Genetics , Nofima , Ås , Norway .
² b Department of Biological Sciences , Flinders University , Bedford Park , South Australia , Australia .
³ c Department of Genetics , La Trobe Institute for Molecular Science, La Trobe University , Bundoora , Victoria , Australia .
⁴ d Life Sciences Computation Initiative, VLSCI, The University of Melbourne , Melbourne , Victoria , Australia .
⁵ e Department of Environment and Primary Industries , BioSciences Research , Bundoora , Victoria , Australia , and.
⁶ f Department of Biochemistry , La Trobe Institute for Molecular Science, La Trobe University , Melbourne , Victoria , Australia.

PMID: 24660910
DOI: 10.3109/19401736.2014.900611

Abstract

The mitochondrial genome of greenlip abalone, Haliotis laevigata, is reported. MiSeq and HiSeq sequencing of one individual was assembled to yield a single 16,545 bp contig. The sequence shares 92% identity to the H. rubra mitochondrial genome (a closely related species that hybridize with H. laevigata in the wild). The sequence will be useful for determining the maternal contribution to hybrid populations, for investigating population structure and stock-enhancement effectiveness.

Keywords: Complete mitochondrial genome; Haliotis laevigata; greenlip abalone; massive parallel sequencing.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Animals
DNA, Mitochondrial / genetics
Gastropoda / genetics*
Genome, Mitochondrial / genetics*
Molecular Sequence Annotation
Molecular Sequence Data
Sequence Analysis, DNA*

Substances

DNA, Mitochondrial

Associated data

GENBANK/KJ472483