Determination and analysis of the complete mitochondrial genome sequence of Taoyuan chicken

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):371-2. doi: 10.3109/19401736.2014.895991. Epub 2014 Mar 11.

Abstract

Taoyuan chicken is excellent native breeds in China. This study firstly determined the complete mitochondrial genome sequence of Taoyuan chicken using PCR-based amplification and Sanger sequencing. The characteristic of the entire mitochondrial genome was analyzed in detail, with the base composition of 30.26% A, 23.79% T, 32.44% C, 13.50% G in the Taoyuan chicken (16,784 bp in length). It contained 2 ribosomal RNA genes, 13 protein-coding genes, 22 transfer RNA genes and a major non-coding control region (D-loop region). The complete mitochondrial genome sequence of Taoyuan chicken will be useful for the phylogenetics of poultry, and be available as basic data for the genetics and breeding.

Keywords: Genome; PCR method; Taoyuan chicken; mitochondrial.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • Chickens / genetics*
  • DNA, Mitochondrial / analysis
  • DNA, Mitochondrial / genetics
  • Genes, Mitochondrial
  • Genome, Mitochondrial*
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Mitochondrial
  • RNA, Ribosomal
  • RNA, Transfer

Associated data

  • GENBANK/KF981434