Integration of targeted sequencing and NIPT into clinical practice in a Chinese family with maple syrup urine disease

Genet Med. 2014 Aug;16(8):594-600. doi: 10.1038/gim.2013.197. Epub 2014 Mar 6.

Abstract

Purpose: This article demonstrates a prominent noninvasive prenatal approach to assist the clinical diagnosis of a single-gene disorder disease, maple syrup urine disease, using targeted sequencing knowledge from the affected family.

Methods: The method reported here combines novel mutant discovery in known genes by targeted massively parallel sequencing with noninvasive prenatal testing.

Results: By applying this new strategy, we successfully revealed novel mutations in the gene BCKDHA (Ex2_4dup and c.392A>G) in this Chinese family and developed a prenatal haplotype-assisted approach to noninvasively detect the genotype of the fetus (transmitted from both parents).

Conclusion: This is the first report of integration of targeted sequencing and noninvasive prenatal testing into clinical practice. Our study has demonstrated that this massively parallel sequencing-based strategy can potentially be used for single-gene disorder diagnosis in the future.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids, Branched-Chain / chemistry
  • Amino Acids, Branched-Chain / genetics*
  • Asian People / genetics
  • Female
  • Humans
  • Male
  • Maple Syrup Urine Disease / diagnosis*
  • Maple Syrup Urine Disease / genetics
  • Mutation, Missense
  • Pregnancy
  • Prenatal Diagnosis*
  • Sequence Analysis, DNA*

Substances

  • Amino Acids, Branched-Chain