Identification of the first small-molecule ligand of the neuronal receptor sortilin and structure determination of the receptor-ligand complex

Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):451-60. doi: 10.1107/S1399004713030149. Epub 2014 Jan 29.

Abstract

Sortilin is a type I membrane glycoprotein belonging to the vacuolar protein sorting 10 protein (Vps10p) family of sorting receptors and is most abundantly expressed in the central nervous system. Sortilin has emerged as a key player in the regulation of neuronal viability and has been implicated as a possible therapeutic target in a range of disorders. Here, the identification of AF40431, the first reported small-molecule ligand of sortilin, is reported. Crystals of the sortilin-AF40431 complex were obtained by co-crystallization and the structure of the complex was solved to 2.7 Å resolution. AF40431 is bound in the neurotensin-binding site of sortilin, with the leucine moiety of AF40431 mimicking the binding mode of the C-terminal leucine of neurotensin and the 4-methylumbelliferone moiety of AF40431 forming π-stacking with a phenylalanine.

Keywords: AF40431; Alzheimer's disease; Vps10p; ligands; proNGF; small molecules; sortilin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Vesicular Transport / antagonists & inhibitors*
  • Adaptor Proteins, Vesicular Transport / chemistry*
  • Adaptor Proteins, Vesicular Transport / genetics
  • Binding Sites
  • Coumarins / chemistry*
  • Crystallization
  • Crystallography, X-Ray
  • HEK293 Cells
  • Humans
  • Leucine / analogs & derivatives*
  • Leucine / chemistry
  • Ligands
  • Neurotensin / chemistry
  • Phenylalanine / chemistry
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Small Molecule Libraries / chemistry*
  • Structure-Activity Relationship

Substances

  • AF40431
  • Adaptor Proteins, Vesicular Transport
  • Coumarins
  • Ligands
  • Recombinant Proteins
  • Small Molecule Libraries
  • Neurotensin
  • Phenylalanine
  • Leucine
  • sortilin

Associated data

  • PDB/4MSL