Phylogenetics of tribe Collabieae (Orchidaceae, Epidendroideae) based on four chloroplast genes with morphological appraisal

PLoS One. 2014 Jan 31;9(1):e87625. doi: 10.1371/journal.pone.0087625. eCollection 2014.

Abstract

Collabieae (Orchidaceae) is a long neglected tribe with confusing tribal and generic delimitation and little-understood phylogenetic relationships. Using plastid matK, psaB, rbcL, and trnH-psbA DNA sequences and morphological evidence, the phylogenetic relationships within the tribe Collabieae were assessed as a basis for revising their tribal and generic delimitation. Collabieae (including the previously misplaced mycoheterotrophic Risleya) is supported as monophyletic and nested within a superclade that also includes Epidendreae, Podochileae, Cymbidieae and Vandeae. Risleya is nested in Collabiinae and sister to Chrysoglossum, a relationship which, despite their great vegetative differences, is supported by floral characters. Ania is a distinct genus supported by both morphological and molecular evidence, while redefined Tainia includes Nephelaphyllum and Mischobulbum. Calanthe is paraphyletic and consists four clades; the genera Gastrorchis, Phaius and Cephalantheropsis should be subsumed within Calanthe. Calanthe sect. Ghiesbreghtia is nested within sect. Calanthe, to which the disputed Calanthe delavayi belongs as well. Our results indicate that, in Collabieae, habit evolved from being epiphytic to terrestrial.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Chloroplast Proteins / genetics*
  • Evolution, Molecular*
  • Genes, Chloroplast / physiology*
  • Orchidaceae / classification
  • Orchidaceae / genetics*
  • Phylogeny*

Substances

  • Chloroplast Proteins

Grants and funding

Funds were provided by a grant from the National Natural Science Foundation of China (Grant No. 31107176) and the Knowledge Innovation Program of the Chinese Academy of Sciences (Grant No. 13214G1014). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.