Critical amino acids within the human immunodeficiency virus type 1 envelope glycoprotein V4 N- and C-terminals contribute to virus entry

PLoS One. 2014 Jan 21;9(1):e86083. doi: 10.1371/journal.pone.0086083. eCollection 2014.

Abstract

The importance of the fourth variable (V4) region of the human immunodeficiency virus 1 (HIV-1) envelope glycoprotein (Env) in virus infection has not been well clarified, though the polymorphism of this region has been found to be associated with disease progression to acquired immunodeficiency syndrome (AIDS). In the present work, we focused on the correlation between HIV-1 gp120 V4 region polymorphism and the function of the region on virus entry, and the possible mechanisms for how the V4 region contributes to virus infectivity. Therefore, we analyzed the differences in V4 sequences along with coreceptor usage preference from CCR5 to CXCR4 and examined the importance of the amino acids within the V4 region for CCR5- and CXCR4-tropic virus entry. In addition, we determined the influence of the V4 amino acids on Env expression and gp160 processing intracellularly, as well as the amount of Env on the pseudovirus surface. The results indicated that V4 tended to have a shorter length, fewer potential N-linked glycosylation sites (PNGS), greater evolutionary distance, and a lower negative net charge when HIV-1 isolates switched from a coreceptor usage preference for CCR5 to CXCR4. The N- and C-terminals of the HIV-1 V4 region are highly conserved and critical to maintain virus entry ability, but only the mutation at position 417 in the context of ADA (a R5-tropic HIV-1 strain) resulted in the ability to utilize CXCR4. In addition, 390L, 391F, 414I, and 416L are critical to maintain gp160 processing and maturation. It is likely that the hydrophobic properties and the electrostatic surface potential of gp120, rather than the conformational structure, greatly contribute to this V4 functionality. The findings provide information to aid in the understanding of the functions of V4 in HIV-1 entry and offer a potential target to aid in the development of entry inhibitors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution
  • Amino Acids / metabolism*
  • Computational Biology
  • Conserved Sequence
  • Evolution, Molecular
  • Glycosylation
  • HEK293 Cells
  • HIV Envelope Protein gp120 / chemistry*
  • HIV Envelope Protein gp120 / metabolism*
  • HIV-1 / metabolism
  • HIV-1 / pathogenicity
  • HIV-1 / physiology*
  • Humans
  • Models, Molecular
  • Molecular Sequence Data
  • Mutant Proteins / chemistry
  • Mutant Proteins / metabolism
  • Protein Structure, Tertiary
  • Receptors, CCR5 / metabolism
  • Receptors, CXCR4 / metabolism
  • Static Electricity
  • Structure-Activity Relationship
  • Viral Tropism
  • Virus Internalization*

Substances

  • Amino Acids
  • HIV Envelope Protein gp120
  • Mutant Proteins
  • Receptors, CCR5
  • Receptors, CXCR4

Grants and funding

This work was supported by Scientific Research Foundation of Heilongjiang Provincial Education Department (Grant 12511184); Heilongjiang Innovation Program in Graduate Education (YJSCX2009-222HLJ); Harbin Medical University Innovation Program in Graduate Education (HCXB2009014); Grant for Innovation Team Program of Heilongjiang Province; Natural Science Foundation of Heilongjiang Province (Grant ZJY0601-01). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.