Systems approaches to study root architecture dynamics

Front Plant Sci. 2013 Dec 26:4:537. doi: 10.3389/fpls.2013.00537.

Abstract

The plant root system is essential for providing anchorage to the soil, supplying minerals and water, and synthesizing metabolites. It is a dynamic organ modulated by external cues such as environmental signals, water and nutrients availability, salinity and others. Lateral roots (LRs) are initiated from the primary root post-embryonically, after which they progress through discrete developmental stages which can be independently controlled, providing a high level of plasticity during root system formation. Within this review, main contributions are presented, from the classical forward genetic screens to the more recent high-throughput approaches, combined with computer model predictions, dissecting how LRs and thereby root system architecture is established and developed.

Keywords: genetic screening; genomics studies; lateral root; root system; systems approach; transcript profiling.

Publication types

  • Review