Ondex Web: web-based visualization and exploration of heterogeneous biological networks

Bioinformatics. 2014 Apr 1;30(7):1034-5. doi: 10.1093/bioinformatics/btt740. Epub 2013 Dec 20.

Abstract

Summary: Ondex Web is a new web-based implementation of the network visualization and exploration tools from the Ondex data integration platform. New features such as context-sensitive menus and annotation tools provide users with intuitive ways to explore and manipulate the appearance of heterogeneous biological networks. Ondex Web is open source, written in Java and can be easily embedded into Web sites as an applet. Ondex Web supports loading data from a variety of network formats, such as XGMML, NWB, Pajek and OXL.

Availability and implementation: http://ondex.rothamsted.ac.uk/OndexWeb.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biology / methods*
  • Data Mining
  • Internet
  • Metabolic Networks and Pathways
  • Software*