Variation in the coding and 3' untranslated regions of the porcine prolactin receptor short form modifies protein expression and function

Anim Genet. 2014 Feb;45(1):74-86. doi: 10.1111/age.12100. Epub 2013 Dec 18.

Abstract

The actions of prolactin (PRL) are mediated by both long (LF) and short isoforms (SF) of the PRL receptor (PRLR). Here, we report on a genetic and functional analysis of the porcine PRLR (pPRLR) SF. Three single nucleotide polymorphisms (SNPs) within exon 11 of the pPRLR-SF give rise to four amino acid haplotypes of the intracellular domain. We identified the dimorphic insertion of a short interspersed repetitive DNA element (PRE-1) along with 32 SNPs and four other insertion/deletion sites within the 3' untranslated region (UTR) of pPRLR-SF. The PRE-1 element reduced protein translation in vitro by 75%, whereas the combination of 10 SNPs and one insertion/deletion decreased translation by 50%. Full-length cDNAs for all four haplotypes of pPRLR-SF were cloned behind the elongation factor 1-alpha promoter and functionally analyzed in vitro. None of the haplotypes could initiate transcription from the ß-casein promoter, whereas all four were dominant negatives against PRL-activation of the pPRLR-LF. Two of the haplotypes completely inhibited pPRLR-LF activity at a four-fold excess, whereas the others required a six-fold excess to impart the same effect. The ligand binding affinities of the pPRLR-SF haplotypes did not differ. Expression of the pPRLR-SF increased linearly during gestation in the endometrium and was hormonally regulated in a tissue-specific manner in the mammary glands and uterus. In conclusion, we identified a PRE-1 and other SNPs in the pPRLR-SF 3' UTR that reduce protein expression and four haplotypes of the pPRLR-SF that suppress pPRLR-LF signaling and may differentially impact the phenotypic effects of PRL in vivo.

Keywords: PRE-1; dominant negative; short interspersed repetitive element; single nucleotide polymorphisms.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • 3' Untranslated Regions*
  • Animals
  • Base Sequence
  • Breeding
  • Exons
  • Female
  • Haplotypes
  • INDEL Mutation
  • Interspersed Repetitive Sequences
  • Molecular Sequence Data
  • Polymorphism, Single Nucleotide*
  • Protein Isoforms / genetics
  • Receptors, Prolactin / genetics*
  • Swine

Substances

  • 3' Untranslated Regions
  • Protein Isoforms
  • Receptors, Prolactin

Associated data

  • GENBANK/JX866766
  • GENBANK/JX946659
  • GENBANK/JX946660
  • GENBANK/JX946661