A convenient system for highly specific and sensitive detection of miRNA expression

RNA. 2014 Feb;20(2):252-9. doi: 10.1261/rna.040220.113. Epub 2013 Dec 17.

Abstract

Since the first miRNA was discovered in 1993, miRNAs have become a hotspot for biological research. In order to feed this demand, a robust method is required to detect miRNA gene expression. Development of a detection method is more difficult for miRNAs than for long RNAs, such as mRNA, owing to their small size. Existing methods have limitations; thus, new methods are required. We describe a new system for detecting miRNA expression, which can distinguish miRNA from its precursor and has single-nucleotide resolution. It has single molecule and multiplex detection potential. It may be performed as a polymerase chain reaction (PCR) method, a blotting method, or a macroarray method according to the analyst's preference. This personalized system provides a convenient tool for the detection of miRNA gene expression.

Keywords: PCR; avidin–biotin detection system; color development; liquid hybridization; miRNA; small RNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Gene Expression Profiling / methods*
  • Inverted Repeat Sequences
  • Limit of Detection
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Oligonucleotide Array Sequence Analysis / methods*
  • Polymerase Chain Reaction / methods*
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • Rats

Substances

  • MicroRNAs
  • RNA Precursors