[Genetic characterization of G II.12 norovirus in Beijing from 2008 to 2009]

Zhonghua Shi Yan He Lin Chuang Bing Du Xue Za Zhi. 2013 Jun;27(3):184-6.
[Article in Chinese]

Abstract

Objective: To reveal the genetic characteristics of GII.12 Norovirus strains isolating from stool samples of adults with diarrhea in Beijing during 2008-2009.

Methods: RdRp, ORF2, ORF3 and ORF1/ORF2 overlap region were respectively amplified by primers using RT-PCR. The products were purified, cloned, sequenced and then aligned, phylogenetic and recombinant analyzed by softwares of DNAStar, MEGA and SimPlot.

Results: According to the phylogenetic analysis, 11 strains belonged to G II.g in the RdRp region,while GII.12 in the ORF2 and ORF3. SimPlot analysis further confirmed the 11 strains were recombinant strains ( G II.g [RdRp]/G II.12 [capsid]).

Conclusion: G II.12 Norovirus prevailing in Beijing and other regions of the world belonged to the same strain, and we identified the genetic characteristics of G II.12 Norovirus in Beijing.

Publication types

  • English Abstract
  • Research Support, Non-U.S. Gov't

MeSH terms

  • China
  • Norovirus / classification
  • Norovirus / genetics*
  • Phylogeny
  • Recombination, Genetic
  • Time Factors