A generic plant RNA isolation method suitable for RNA-Seq and suppression subtractive hybridization

Genet Mol Res. 2013 Nov 18;12(4):5537-46. doi: 10.4238/2013.November.18.4.

Abstract

A recently developed revolutionary approach to transcriptomics, RNA-Seq, and suppression subtractive hybridization are powerful tools for gene expression research. However, currently, the difficulty of isolating high-quality RNAs from plant tissues bearing abundant complex polysaccharides, polyphenolics, and secondary metabolites is a serious problem that not only limits the application of these technologies but also hinders studies dealing with RNA in general. We have developed a consistent protocol to prepare highly intact and pure RNAs from tissues of a variety of field-grown plant species, with high yields, in 2 to 3 h. Additionally, this method can be readily applied to mammalian, yeast, and bacterial cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Fractionation / methods
  • Chemical Fractionation / methods
  • Nucleic Acid Hybridization
  • Plant Cells / chemistry
  • RNA, Plant / chemistry
  • RNA, Plant / isolation & purification*
  • RNA, Plant / standards
  • Sequence Analysis, RNA

Substances

  • RNA, Plant