Abstract
An epidemic caused by influenza A (H7N9) virus was recently reported in China. Deep sequencing revealed the full genome of the virus obtained directly from a patient's sputum without virus culture. The full genome showed substantial sequence heterogeneity and large differences compared with that from embryonated chicken eggs.
Keywords:
H7N9; avian-origin; culture-free; deep sequencing; direct sequencing; influenza; influenza A virus; viruses.
Publication types
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Research Support, Non-U.S. Gov't
MeSH terms
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Animals
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Chick Embryo
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China
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Female
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Genome, Viral*
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Hemagglutinin Glycoproteins, Influenza Virus / genetics
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High-Throughput Nucleotide Sequencing
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Humans
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Influenza A Virus, H7N9 Subtype / classification
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Influenza A Virus, H7N9 Subtype / genetics*
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Influenza A Virus, H7N9 Subtype / isolation & purification
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Influenza, Human / epidemiology
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Influenza, Human / virology
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Middle Aged
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Molecular Sequence Data
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Phylogeny
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Sequence Analysis, DNA
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Sputum / virology
Substances
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Hemagglutinin Glycoproteins, Influenza Virus
Associated data
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GENBANK/KF226105
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GENBANK/KF226106
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GENBANK/KF226107
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GENBANK/KF226108
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GENBANK/KF226109
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GENBANK/KF226110
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GENBANK/KF226111
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GENBANK/KF226112
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GENBANK/KF226113
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GENBANK/KF226114
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GENBANK/KF226115
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GENBANK/KF226116
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GENBANK/KF226117
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GENBANK/KF226118
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GENBANK/KF226119
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GENBANK/KF226120
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GENBANK/KF278742
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GENBANK/KF278743
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GENBANK/KF278744
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GENBANK/KF278745
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GENBANK/KF278746
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GENBANK/KF278747
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GENBANK/KF278748
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GENBANK/KF278749