Constitutive nuclear localization of an alternatively spliced sirtuin-2 isoform

J Mol Biol. 2014 Apr 17;426(8):1677-91. doi: 10.1016/j.jmb.2013.10.027. Epub 2013 Oct 29.

Abstract

Sirtuin-2 (SIRT2), the cytoplasmic member of the sirtuin family, has been implicated in the deacetylation of nuclear proteins. Although the enzyme has been reported to be located to the nucleus during G2/M phase, its spectrum of targets suggests functions in the nucleus throughout the cell cycle. While a nucleocytoplasmic shuttling mechanism has been proposed for SIRT2, recent studies have indicated the presence of a constitutively nuclear isoform. Here we report the identification of a novel splice variant (isoform 5) of SIRT2 that lacks a nuclear export signal and encodes a predominantly nuclear isoform. This novel isoform 5 fails to show deacetylase activity using several assays, both in vitro and in vivo, and we are led to conclude that this isoform is catalytically inactive. Nevertheless, it retains the ability to interact with p300, a known interaction partner. Moreover, changes in intrinsic tryptophan fluorescence upon denaturation indicate that the protein is properly folded. These data, together with computational analyses, confirm the structural integrity of the catalytic domain. Our results suggest an activity-independent nuclear function of the novel isoform.

Keywords: NAD(+)-dependent signaling; localization; molecular genetics; p300; protein structure.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5' Untranslated Regions
  • Alternative Splicing
  • Catalytic Domain / genetics
  • Cell Nucleus / enzymology
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Models, Molecular
  • Nuclear Export Signals
  • Protein Conformation
  • Protein Folding
  • Protein Isoforms / chemistry
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • Protein Structure, Tertiary
  • RNA Precursors / genetics
  • RNA Precursors / metabolism
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sirtuin 2 / chemistry
  • Sirtuin 2 / genetics*
  • Sirtuin 2 / metabolism*
  • Static Electricity

Substances

  • 5' Untranslated Regions
  • Nuclear Export Signals
  • Protein Isoforms
  • RNA Precursors
  • Recombinant Proteins
  • SIRT2 protein, human
  • Sirtuin 2