Substrate protein switches GroE chaperonins from asymmetric to symmetric cycling by catalyzing nucleotide exchange

Proc Natl Acad Sci U S A. 2013 Nov 12;110(46):E4289-97. doi: 10.1073/pnas.1317702110. Epub 2013 Oct 28.

Abstract

The complex kinetics of Pi and ADP release by the chaperonin GroEL/GroES is influenced by the presence of unfolded substrate protein (SP). Without SP, the kinetics of Pi release are described by four phases: a "lag," a "burst" of ATP hydrolysis by the nascent cis ring, a "delay" caused by ADP release from the nascent trans ring, and steady-state ATP hydrolysis. The release of Pi precedes the release of ADP. The rate-determining step of the asymmetric cycle is the release of ADP from the trans ring of the GroEL-GroES1 "bullet" complex that is, consequently, the predominant species. In the asymmetric cycle, the two rings of GroEL function alternately, 180° out of phase. In the presence of SP, a change in the kinetic mechanism occurs. With SP present, the kinetics of ADP release are also described by four phases: a lag, a "surge" of ADP release attributable to SP-induced ADP/ATP exchange, and a "pause" during which symmetrical "football" particles are formed, followed by steady-state ATP hydrolysis. SP catalyzes ADP/ATP exchange on the trans ring. Now ADP release precedes the release of Pi, and the rate-determining step of the symmetric cycle becomes the hydrolysis of ATP by the symmetric GroEL-GroES2 football complex that is, consequently, the predominant species. A FRET-based analysis confirms that asymmetric GroEL-GroES1 bullets predominate in the absence of SP, whereas symmetric GroEL-GroES2 footballs predominate in the presence of SP. This evidence suggests that symmetrical football particles are the folding functional form of the chaperonin machine in vivo.

MeSH terms

  • Adenosine Triphosphate / metabolism*
  • Chaperonin 10 / genetics
  • Chaperonin 10 / metabolism*
  • Chaperonin 60 / genetics
  • Chaperonin 60 / metabolism*
  • Coumarins
  • Fluorescence Resonance Energy Transfer
  • Hydrolysis
  • Kinetics
  • Lactalbumin
  • Multiprotein Complexes / genetics
  • Multiprotein Complexes / metabolism*
  • Mutation, Missense / genetics
  • Phosphate-Binding Proteins / metabolism
  • Protein Folding*

Substances

  • Chaperonin 10
  • Chaperonin 60
  • Coumarins
  • Multiprotein Complexes
  • Phosphate-Binding Proteins
  • N-(2-(1-maleimidyl)ethyl)-7-(diethylamino)coumarin-3-carboxamide
  • Adenosine Triphosphate
  • Lactalbumin