Comprehensive two-dimensional gas chromatography combined to multivariate data analysis for detection of disease-resistant clones of Eucalyptus

Talanta. 2013 Nov 15:116:1079-84. doi: 10.1016/j.talanta.2013.08.033. Epub 2013 Aug 26.

Abstract

In this paper it is reported the use of the chromatographic profiles from volatile fractions of plant clones - in this case, hybrids of Eucalyptus grandis×Eucalyptus urophylla - to determine specimens susceptible to rust disease. The analytes were isolated by headspace solid phase microextraction (HS-SPME) and analyzed by comprehensive two-dimensional gas chromatography combined to fast quadrupole mass spectrometry (GC×GC-qMS). Parallel Factor Analysis (PARAFAC) was employed for estimate the correlation between the chromatographic profiles and resistance against Eucalyptus rust, after preliminary variable selection performed by Fisher ratio analysis. The proposed method allowed the differentiation between susceptible and non-susceptible clones and determination of three resistance biomarkers. This approach can be a valuable alternative for the otherwise time-consuming and labor-intensive methods commonly used.

Keywords: Comprehensive two-dimensional gas chromatography; Mass spectrometry; Metabolic profile; Parallel factor analysis; Puccinia psidii; Resistance biomarkers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers / analysis
  • Chimera
  • Eucalyptus / chemistry*
  • Eucalyptus / immunology
  • Eucalyptus / metabolism
  • Gas Chromatography-Mass Spectrometry / methods*
  • Multivariate Analysis
  • Plant Diseases / immunology*
  • Plant Diseases / microbiology
  • Plant Immunity*
  • Plant Leaves / chemistry*
  • Plant Leaves / immunology
  • Plant Leaves / metabolism
  • Solid Phase Microextraction
  • Volatile Organic Compounds / analysis*

Substances

  • Biomarkers
  • Volatile Organic Compounds