Prospecting genomes for lasso peptides

J Ind Microbiol Biotechnol. 2014 Feb;41(2):333-44. doi: 10.1007/s10295-013-1357-4. Epub 2013 Oct 19.

Abstract

Genome mining has unlocked a veritable treasure chest of natural compounds. However, each family of natural products requires a genome-mining approach tailored to its unique features to be successful. Lasso peptides are ribosomally synthesized and posttranslationally modified products with a unique three-dimensional structure. Advances in the understanding of these molecules have informed the design of strategies to identify new members of the class in sequenced genomes. This review presents the bioinformatic methods used to discover novel lasso peptides and describes how such analyses have afforded insights into the biosynthesis and evolution of this peptide class.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Amino Acid Sequence
  • Biological Products / chemistry*
  • Biological Products / metabolism*
  • Genomics / methods*
  • Molecular Sequence Data
  • Peptide Biosynthesis
  • Peptides / chemistry*
  • Peptides / genetics
  • Peptides / metabolism*
  • Protein Processing, Post-Translational

Substances

  • Biological Products
  • Peptides