Automatic detection of arterial input function in dynamic contrast enhanced MRI based on affinity propagation clustering

J Magn Reson Imaging. 2014 May;39(5):1327-37. doi: 10.1002/jmri.24259. Epub 2013 Oct 10.

Abstract

Purpose: To automatically and robustly detect the arterial input function (AIF) with high detection accuracy and low computational cost in dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI).

Materials and methods: In this study, we developed an automatic AIF detection method using an accelerated version (Fast-AP) of affinity propagation (AP) clustering. The validity of this Fast-AP-based method was proved on two DCE-MRI datasets, i.e., rat kidney and human head and neck. The detailed AIF detection performance of this proposed method was assessed in comparison with other clustering-based methods, namely original AP and K-means, as well as the manual AIF detection method.

Results: Both the automatic AP- and Fast-AP-based methods achieved satisfactory AIF detection accuracy, but the computational cost of Fast-AP could be reduced by 64.37-92.10% on rat dataset and 73.18-90.18% on human dataset compared with the cost of AP. The K-means yielded the lowest computational cost, but resulted in the lowest AIF detection accuracy. The experimental results demonstrated that both the AP- and Fast-AP-based methods were insensitive to the initialization of cluster centers, and had superior robustness compared with K-means method.

Conclusion: The Fast-AP-based method enables automatic AIF detection with high accuracy and efficiency.

Keywords: K-means clustering; affinity propagation clustering; arterial input function; dynamic contrast enhanced magnetic resonance imaging.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms*
  • Animals
  • Arteries / anatomy & histology
  • Arteries / physiology*
  • Blood Flow Velocity / physiology
  • Computer Simulation
  • Heterocyclic Compounds / pharmacokinetics*
  • Humans
  • Image Enhancement / methods
  • Image Interpretation, Computer-Assisted / methods
  • Imaging, Three-Dimensional / methods
  • Kidney / blood supply
  • Magnetic Resonance Angiography / methods*
  • Models, Biological*
  • Organometallic Compounds / pharmacokinetics*
  • Pattern Recognition, Automated / methods*
  • Rats
  • Renal Circulation / physiology
  • Reproducibility of Results
  • Sensitivity and Specificity

Substances

  • Heterocyclic Compounds
  • Organometallic Compounds
  • gadolinium 1,4,7,10-tetraazacyclododecane-N,N',N'',N'''-tetraacetate