Desulfatiferula berrensis sp. nov., a n-alkene-degrading sulfate-reducing bacterium isolated from estuarine sediments

Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):540-544. doi: 10.1099/ijs.0.057174-0. Epub 2013 Oct 11.

Abstract

A novel sulfate-reducing bacterium designated strain BE2801(T) was isolated from oil-polluted estuarine sediments (Berre Lagoon, France). Cells were Gram-stain-negative, motile, slightly curved or vibrioid rods. Optimal growth of strain BE2801(T) occurred at 30-32 °C, 0.5-1.5% NaCl (w/v) and pH 7.2-7.4. Strain BE2801(T) grew with C4 to C20 fatty acids or C12 to C20 n-alkenes as electron donors. Acetate and carbon dioxide were the oxidation products. The major cellular fatty acids were C16 : 0, C(16 : 1)ω7c and C(18 : 1)ω7. The DNA G+C content was 50.2 mol%. 16S rRNA and dsrAB gene sequence analysis indicated that strain BE2801(T) was a member of the family Desulfobacteraceae within the class Deltaproteobacteria. DNA-DNA hybridization with the most closely related taxon demonstrated 14.8 % relatedness. Based on phenotypic and phylogenetic evidence, strain BE2801(T) ( = DSM 25524(T) = JCM 18157(T)) is proposed to be a representative of a novel species of the genus Desulfatiferula, for which the name Desulfatiferula berrensis sp. nov. is suggested.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • DNA, Bacterial / genetics
  • Deltaproteobacteria / classification*
  • Deltaproteobacteria / genetics
  • Deltaproteobacteria / isolation & purification
  • Estuaries*
  • Fatty Acids / chemistry
  • France
  • Geologic Sediments / microbiology*
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Petroleum Pollution
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sulfur-Reducing Bacteria / classification
  • Sulfur-Reducing Bacteria / genetics
  • Sulfur-Reducing Bacteria / isolation & purification
  • Wastewater

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Waste Water

Associated data

  • GENBANK/HE613444
  • GENBANK/HE613445