Phosphorylation of neuronal Lysine-Specific Demethylase 1LSD1/KDM1A impairs transcriptional repression by regulating interaction with CoREST and histone deacetylases HDAC1/2

J Neurochem. 2014 Mar;128(5):603-16. doi: 10.1111/jnc.12457. Epub 2013 Oct 23.

Abstract

Epigenetic mechanisms play important roles in brain development, orchestrating proliferation, differentiation, and morphogenesis. Lysine-Specific Demethylase 1 (LSD1 also known as KDM1A and AOF2) is a histone modifier involved in transcriptional repression, forming a stable core complex with the corepressors corepressor of REST (CoREST) and histone deacetylases (HDAC1/2). Importantly, in the mammalian CNS, neuronal LSD1-8a, an alternative splicing isoform of LSD1 including the mini-exon E8a, sets alongside LSD1 and is capable of enhancing neurite growth and morphogenesis. Here, we describe that the morphogenic properties of neuronal LSD1-8a require switching off repressive activity and this negative modulation is mediated in vivo by phosphorylation of the Thr369b residue coded by exon E8a. Three-dimensional crystal structure analysis using a phospho-mimetic mutant (Thr369bAsp), indicate that phosphorylation affects the residues surrounding the exon E8a-coded amino acids, causing a local conformational change. We suggest that phosphorylation, without affecting demethylase activity, causes in neurons CoREST and HDAC1/2 corepressors detachment from LSD1-8a and impairs neuronal LSD1-8a repressive activity. In neurons, Thr369b phosphorylation is required for morphogenic activity, converting neuronal LSD1-8a in a dominant-negative isoform, challenging LSD1-mediated transcriptional repression on target genes.

Keywords: KDM1A/LSD1; corepressor; epigenetics; neuronal maturation; transcription.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Brain Chemistry / physiology
  • Cells, Cultured
  • Chromatin / metabolism
  • Co-Repressor Proteins / biosynthesis*
  • Co-Repressor Proteins / genetics*
  • Enzyme Repression
  • Exons / genetics
  • Gene Expression Regulation, Enzymologic / genetics
  • Genes, Reporter
  • Histone Deacetylase 1 / metabolism*
  • Histone Deacetylase 2 / metabolism*
  • Histone Demethylases / biosynthesis*
  • Histone Demethylases / genetics*
  • Immunoprecipitation
  • Isoenzymes / metabolism
  • Mass Spectrometry
  • Mutagenesis, Site-Directed
  • Neurites / metabolism
  • Phosphorylation
  • Protein Conformation
  • Rats
  • Transcription, Genetic / genetics*

Substances

  • Chromatin
  • Co-Repressor Proteins
  • Isoenzymes
  • Histone Demethylases
  • KDM1A protein, rat
  • Histone Deacetylase 1
  • Histone Deacetylase 2