Rice black-streaked dwarf virus genome segment S5 is a bicistronic mRNA in infected plants

Arch Virol. 2014 Feb;159(2):307-14. doi: 10.1007/s00705-013-1832-2. Epub 2013 Sep 8.

Abstract

Rice black-streaked dwarf virus (RBSDV) is a recognized member of the genus Fijivirus, family Reoviridae. Genome segment S5 has a putative second ORF partially overlapping the major ORF but in a different reading frame. This putative ORF is present in a published sequence and in two Chinese isolates now sequenced. Antibodies were raised against purified P5-1 and P5-2 fusion proteins expressed in a prokaryotic system. In western blots, these antibodies reacted with proteins of about 106 and 27 kDa, respectively, as predicted by sequence analysis. In immunoelectron microscopy, antibodies to P5-1 reacted with viroplasms, indicating that P5-1 is a component of viroplasms, but no labeling was observed with P5-2 antisera. Northern blot assays showed that the genome segment S5 was transcribed as a single mRNA with no subgenomic RNA. These results show that S5 is functionally bicistronic in infected plants. Possible translational mechanisms for P5-2 are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Viral / metabolism
  • Blotting, Northern
  • Genes*
  • Humans
  • Microscopy, Immunoelectron
  • Molecular Sequence Data
  • Open Reading Frames
  • Oryza / virology*
  • Protein Biosynthesis
  • RNA, Messenger / genetics*
  • RNA, Viral / genetics*
  • Reoviridae / genetics*
  • Sequence Analysis, DNA
  • Staining and Labeling / methods
  • Transcription, Genetic

Substances

  • Antibodies, Viral
  • RNA, Messenger
  • RNA, Viral

Associated data

  • GENBANK/KC801046
  • GENBANK/KC801047