[Molecular modeling of interaction of 17(20)Z- and 17(20)E-pregna-5,17(20)-dien-21-oyl amides with the nuclear receptor LXRbeta]

Biomed Khim. 2013 May-Jun;59(3):321-9. doi: 10.18097/pbmc20135903321.
[Article in Russian]

Abstract

Aiming the search of novel regulators of lipid metabolism and their potential targets, in this study we performed molecular modeling of eight isomeric 17(20)Z- and 17(20)E-pregna-5,17(20)-dien-21-oyl amides differing in structure of the amide moiety. Analysis of the low energy conformers revealed that all 17(20)E-isomers had three main energy minima (corresponding to values of the dihedral angle theta20,21 (C17 = C20-C21 = 0) to approximately 0 degrees, to approximately 120 degrees and to approximately 240 degrees), the most occupied minimum was found to correspond to theta20,21 to approximately 0 degrees; while 17(20)Z-isomers had either one or two pools of low energy conformations. Molecular docking of these compounds to the ligand-binding site of the nuclear receptor LXRbeta (a potential target) indicates high probability of binding for E-isomers and the absence of that for Z-isomers. Results of the molecular modeling were confirmed by an experiment in which stimulation of triglyceride biosynthesis in Hep G2 cells in the presence of 17(20)E-3beta-hydroxypregna-5,17(20)-dien-21-oyl (hydroxyethyl)amide was demonstrated.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amides* / chemical synthesis
  • Amides* / chemistry
  • Amides* / pharmacology
  • Hep G2 Cells
  • Humans
  • Liver X Receptors
  • Molecular Docking Simulation
  • Orphan Nuclear Receptors* / agonists
  • Orphan Nuclear Receptors* / chemistry
  • Orphan Nuclear Receptors* / metabolism
  • Protein Binding
  • Triglycerides / biosynthesis*

Substances

  • Amides
  • Liver X Receptors
  • Orphan Nuclear Receptors
  • Triglycerides