Human α-L-iduronidase uses its own N-glycan as a substrate-binding and catalytic module

Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14628-33. doi: 10.1073/pnas.1306939110. Epub 2013 Aug 19.

Abstract

N-glycosylation is a major posttranslational modification that endows proteins with various functions. It is established that N-glycans are essential for the correct folding and stability of some enzymes; however, the actual effects of N-glycans on their activities are poorly understood. Here, we show that human α-l-iduronidase (hIDUA), of which a dysfunction causes accumulation of dermatan/heparan sulfate leading to mucopolysaccharidosis type I, uses its own N-glycan as a substrate binding and catalytic module. Structural analysis revealed that the mannose residue of the N-glycan attached to N372 constituted a part of the substrate-binding pocket and interacted directly with a substrate. A deglycosylation study showed that enzyme activity was highly correlated with the N-glycan attached to N372. The kinetics of native and deglycosylated hIDUA suggested that the N-glycan is also involved in catalytic processes. Our study demonstrates a previously unrecognized function of N-glycans.

Keywords: N-linked glycan; X-ray crystallography; glycoside hydrolase family 39.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Biocatalysis
  • Circular Dichroism
  • Crystallography, X-Ray
  • Dermatan Sulfate / metabolism
  • Electrophoresis, Polyacrylamide Gel
  • Heparitin Sulfate / metabolism
  • Humans
  • Iduronidase / chemistry*
  • Iduronidase / genetics
  • Iduronidase / metabolism*
  • Kinetics
  • Mannose / chemistry
  • Mannose / metabolism
  • Models, Molecular*
  • Molecular Sequence Data
  • Mucopolysaccharidosis I / enzymology
  • Mucopolysaccharidosis I / metabolism
  • Mutation
  • Polysaccharides / chemistry*
  • Polysaccharides / metabolism*
  • Protein Binding
  • Protein Structure, Tertiary
  • Sequence Homology, Amino Acid
  • Substrate Specificity

Substances

  • Polysaccharides
  • Dermatan Sulfate
  • Heparitin Sulfate
  • Iduronidase
  • Mannose

Associated data

  • PDB/3W81
  • PDB/3W82