Poly (AT) deletion/insertion polymorphism of the XPC gene contributes to urinary system cancer susceptibility: a meta-analysis

Gene. 2013 Oct 10;528(2):335-42. doi: 10.1016/j.gene.2013.06.092. Epub 2013 Jul 24.

Abstract

Numerous studies have investigated the association between xeroderma pigmentosum complementation group C (XPC) poly (AT) deletion/insertion (PAT -/+) polymorphism and cancer susceptibility; however, the findings are inconsistent. Therefore, we performed a meta-analysis based on 32 publications including 10,214 cases and 11,302 controls to acquire a more robust estimation of the relationship. We searched publications from MEDLINE, EMBASE and CBM which assessed the associations between XPC PAT -/+ polymorphism and cancer risk. We calculated pooled odds ratio (OR) and 95% confidence interval (CI) by using either fixed-effects or random-effects model. We found that individuals carrying the PAT +/+ genotype have significantly increased cancer risk (PAT +/+ vs.

Pat -/-: OR=1.18, 95% CI=1.03-1.35 and recessive model: OR=1.19, 95% CI=1.06-1.33). Further stratification analysis showed a significantly increased risk for prostate cancer (PAT +/+ vs.

Pat -/-: OR=2.20, 95% CI=1.39-3.48, recessive model: OR=2.07, 95% CI=1.33-3.23 and PAT + vs.

Pat -: OR=1.39, 95% CI=1.12-1.71), bladder cancer (recessive model: OR=1.33, 95% CI=1.03-1.72), Caucasian ethnicity (recessive model: OR=1.21, 95% CI=1.02-1.43), population-based studies (recessive model: OR=1.23, 95% CI=1.05-1.43) and studies with relatively large sample size (PAT +/+ vs.

Pat -/-: OR=1.18, 95% CI=1.04-1.35 and recessive model: OR=1.20, 95% CI=1.08-1.33). Despite some limitations, this meta-analysis established solid statistical evidence for the association between the XPC PAT +/+ genotype and cancer risk, especially for urinary system cancer, but this association warrants further validation in single large studies.

Keywords: CBM; CI; Chinese Biomedical; DNA repair capacity; DRC; HWE; Hardy–Weinberg equilibrium; Meta-analysis; NER; OR; PAT; PAT −/+; Polymorphism; SCCNH; SNP; Susceptibility; XPC; confidence interval; nucleotide excision repair; odds ratio; poly (AT) deletion/insertion; single nucleotide polymorphism; squamous cell carcinoma of the head and neck; xeroderma pigmentosum complementation group C.

Publication types

  • Meta-Analysis
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Case-Control Studies
  • DNA-Binding Proteins / genetics*
  • Genetic Association Studies
  • Genetic Predisposition to Disease
  • Humans
  • INDEL Mutation*
  • Polymorphism, Genetic
  • Urinary Bladder Neoplasms / genetics*

Substances

  • DNA-Binding Proteins
  • XPC protein, human