MicroRNA changes associated with atypical CYP1A1 inducer BMS-764459

Toxicology. 2013 Sep 15;311(3):169-77. doi: 10.1016/j.tox.2013.06.006. Epub 2013 Jul 2.

Abstract

The corticotrophin releasing factor (CRF) receptor I antagonist, BMS-764459 (evaluated as a potential treatment of affective disorders), was orally dosed to female Sprague-Dawley rats once daily for 2 weeks (vehicle control or 175mg/kg/day). To investigate the mechanism of BMS-764459-related liver weight increases, total liver RNA was isolated and evaluated for mRNA gene expression by microarray analysis (assessing the expression of approximately 24,000 genes) from snap-frozen tissue. Subsequently, mRNA and miRNA (microRNA) were also analyzed 5 years later from FFPE (Formalin Fixed Paraffin Embedded) samples via RT-PCR (about 800 miRNA evaluated). Genomic analyses showed that BMS-764459 induces AhR target genes with additional inductions of CYP2B, CYP3A, and Abcc3 consistent with the gene expression pattern of atypical CYP1A1 inducers. Analysis of miRNA expression identified a number of significantly affected miRNAs. To further evaluate their role in atypical CYP1A1 induction, an in silico evaluation of differentially expressed miRNA was performed and their putative mRNA 3'-UTR (untranslated region) binding sequences were evaluated. MiR-680 and miR-29a were identified as potential regulators and biomarkers of atypical CYP1A1 induction by regulating Abcc3, CYP3A and CYP2B as well as a number of AhR targeted genes.

Keywords: AhR; CYP1A1; miRNA.

MeSH terms

  • Aminopyridines / pharmacology*
  • Animals
  • Cytochrome P-450 CYP1A1 / biosynthesis*
  • Enzyme Induction
  • Female
  • Formaldehyde / pharmacology
  • Gene Expression Profiling
  • Liver / drug effects*
  • Liver / metabolism
  • MicroRNAs / metabolism*
  • Oligonucleotide Array Sequence Analysis
  • Paraffin Embedding / methods
  • Pyrazines / pharmacology*
  • RNA, Messenger / metabolism
  • Rats
  • Rats, Sprague-Dawley
  • Real-Time Polymerase Chain Reaction

Substances

  • Aminopyridines
  • BMS-764459
  • MicroRNAs
  • Pyrazines
  • RNA, Messenger
  • Formaldehyde
  • Cytochrome P-450 CYP1A1