Synthesis, spectroscopic and structural characterization of 5-benzoyl-4-phenyl-2-methylthio-1H-pyrimidine with theoretical calculations using density functional theory

Spectrochim Acta A Mol Biomol Spectrosc. 2013 Oct:114:92-100. doi: 10.1016/j.saa.2013.05.050. Epub 2013 May 23.

Abstract

In this paper, we will report a combined experimental and theoretical investigation of the molecular structure and spectroscopic parameters (FT-IR, (1)H NMR, (13)C NMR) of 5-benzoyl-4-phenyl-2-methylthio-1H-pyrimidine. The compound crystallizes in the triclinic space group P-1 with Z=2. The molecular geometry was also optimized using density functional theory (DFT/B3LYP) method with the 6-311G(d,p) and 6-311++G(d,p) basis sets in ground state and compared with the experimental data. All the assignments of the theoretical frequencies were performed by potential energy distributions using VEDA 4 program. Information about the size, shape, charge density distribution and site of chemical reactivity of the molecules has been obtained by mapping electron density isosurface with electrostatic potential (ESP). Also, non-linear optical properties of the title compound were performed at B3LYP/6-311++G(d,p) level. The theoretical results showed an excellent agreement with the experimental values.

Keywords: 2-Thiopyrimidine; DFT calculations; FT-IR; NMR; X-ray structure determination.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Crystallography, X-Ray
  • Magnetic Resonance Spectroscopy*
  • Models, Molecular
  • Pyrimidinones / chemical synthesis
  • Pyrimidinones / chemistry*
  • Quantum Theory
  • Spectroscopy, Fourier Transform Infrared*

Substances

  • Pyrimidinones