Stabilization of a protein conferred by an increase in folded state entropy

Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10628-33. doi: 10.1073/pnas.1302284110. Epub 2013 Jun 10.

Abstract

Entropic stabilization of native protein structures typically relies on strategies that serve to decrease the entropy of the unfolded state. Here we report, using a combination of experimental and computational approaches, on enhanced thermodynamic stability conferred by an increase in the configurational entropy of the folded state. The enhanced stability is observed upon modifications of a loop region in the enzyme acylphosphatase and is achieved despite significant enthalpy losses. The modifications that lead to increased stability, as well as those that result in destabilization, however, strongly compromise enzymatic activity, rationalizing the preservation of the native loop structure even though it does not provide the protein with maximal stability or kinetic foldability.

Keywords: loop closure entropy; molecular dynamics; protein folding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acid Anhydride Hydrolases / chemistry*
  • Acid Anhydride Hydrolases / genetics
  • Acylphosphatase
  • Biophysical Phenomena
  • Computer Simulation
  • Entropy
  • Enzyme Stability
  • Humans
  • Models, Molecular
  • Molecular Dynamics Simulation
  • Mutagenesis, Insertional
  • Mutagenesis, Site-Directed
  • Mutant Proteins / chemistry
  • Mutant Proteins / genetics
  • Protein Folding
  • Protein Stability*
  • Thermodynamics

Substances

  • Mutant Proteins
  • Acid Anhydride Hydrolases