Measurement of protein-ligand complex formation

Methods Mol Biol. 2013:1008:63-99. doi: 10.1007/978-1-62703-398-5_3.

Abstract

Experimental approaches to detect, measure, and quantify protein-ligand binding, along with their theoretical bases, are described. A range of methods for detection of protein-ligand interactions is summarized. Specific protocols are provided for a nonequilibrium procedure pull-down assay, for an equilibrium direct binding method and its modification into a competition-based measurement and for steady-state measurements based on the effects of ligands on enzyme catalysis.

MeSH terms

  • Autoradiography
  • Binding Sites
  • Binding, Competitive
  • Catalysis
  • Fluorescence Resonance Energy Transfer
  • Humans
  • Kinetics
  • Ligands*
  • Luminescent Measurements
  • Molecular Dynamics Simulation*
  • Protein Binding
  • Proteins / chemistry*
  • Thermodynamics

Substances

  • Ligands
  • Proteins