Adenosine monophosphate forms ordered arrays in multilamellar lipid matrices: insights into assembly of nucleic acid for primitive life

PLoS One. 2013 May 7;8(5):e62810. doi: 10.1371/journal.pone.0062810. Print 2013.

Abstract

A fundamental question of biology is how nucleic acids first assembled and then were incorporated into the earliest forms of cellular life 4 billion years ago. The polymerization of nucleotides is a condensation reaction in which phosphodiester bonds are formed. This reaction cannot occur in aqueous solutions, but guided polymerization in an anhydrous lipid environment could promote a non-enzymatic condensation reaction in which oligomers of single stranded nucleic acids are synthesized. We used X-ray scattering to investigate 5'-adenosine monophosphate (AMP) molecules captured in a multilamellar phospholipid matrix composed of dimyristoylphosphatidylcholine. Bragg peaks corresponding to the lateral organization of the confined AMP molecules were observed. Instead of forming a random array, the AMP molecules are highly entangled, with the phosphate and ribose groups in close proximity. This structure may facilitate polymerization of the nucleotides into RNA-like polymers.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Monophosphate / chemistry*
  • Adenosine Monophosphate / metabolism*
  • DNA / chemistry
  • DNA / metabolism*
  • Lipid Bilayers / chemistry
  • Lipid Bilayers / metabolism
  • Models, Molecular
  • Molecular Conformation
  • Phosphates / metabolism
  • Phospholipids / chemistry*
  • Phospholipids / metabolism*
  • RNA / chemistry
  • RNA / metabolism*
  • Ribose / metabolism

Substances

  • Lipid Bilayers
  • Phosphates
  • Phospholipids
  • Adenosine Monophosphate
  • RNA
  • Ribose
  • DNA

Grants and funding

This research was funded by the Natural Sciences and Engineering Research Council of Canada (NSERC), the National Research Council Canada (NRC), the Canada Foundation for Innovation (CFI) and the Ontario Ministry of Economic Development and Innovation. H.D. is the recipient of an NSERC-Undergraduate Student Research Award, M.C.R. is the recipient of an Early Researcher Award of the Province of Ontario. L.T. is supported through a QEII scholarship through the Origins Institute at McMaster. D.W.D. is the recipient of the Lonsdale Research Award that supports research on the origin of life. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.