Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori

Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):735-46. doi: 10.1107/S0907444913001236. Epub 2013 Apr 11.

Abstract

Maturation of cytochrome c is carried out in the bacterial periplasm, where specialized thiol-disulfide oxidoreductases provide the correct reduction of oxidized apocytochrome c before covalent haem attachment. HP0377 from Helicobacter pylori is a thioredoxin-fold protein that has been implicated as a component of system II for cytochrome c assembly and shows limited sequence similarity to Escherichia coli DsbC, a disulfide-bond isomerase. To better understand the role of HP0377, its crystal structures have been determined in both reduced and partially oxidized states, which are highly similar to each other. Sedimentation-equilibrium experiments indicate that HP0377 is monomeric in solution. HP0377 adopts a thioredoxin fold but shows distinctive variations as in other thioredoxin-like bacterial periplasmic proteins. The active site of HP0377 closely resembles that of E. coli DsbC. A reductase assay suggests that HP0377 may play a role as a reductase in the biogenesis of holocytochrome c553 (HP1227). Binding experiments indicate that it can form a covalent complex with HP0518, a putative L,D-transpeptidase with a catalytic cysteine residue, via a disulfide bond. Furthermore, physicochemical properties of HP0377 and its R86A variant have been determined. These results suggest that HP0377 may perform multiple functions as a reductase in H. pylori.

Keywords: DsbC; HP0377; HP0518; HP1227; Helicobacter pylori; cytochrome c biogenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism
  • Catalytic Domain
  • Crystallography, X-Ray
  • Cysteine / chemistry
  • Cytochromes c / metabolism
  • Helicobacter pylori / chemistry*
  • Helicobacter pylori / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Periplasmic Proteins / chemistry
  • Periplasmic Proteins / metabolism
  • Protein Conformation
  • Protein Disulfide Reductase (Glutathione) / chemistry*
  • Protein Disulfide Reductase (Glutathione) / metabolism

Substances

  • Bacterial Proteins
  • Periplasmic Proteins
  • Cytochromes c
  • Protein Disulfide Reductase (Glutathione)
  • Cysteine

Associated data

  • PDB/4FYB
  • PDB/4FYC