Stepwise regulation of hole transport in DNA by control of triplex formation

Bioorg Med Chem. 2013 May 15;21(10):2682-6. doi: 10.1016/j.bmc.2013.03.055. Epub 2013 Apr 2.

Abstract

A functionality for regulating hole transport efficiency is a prerequisite for the utilization of DNA duplexes as nanodevices. Herein, we report the regulation of hole transport in anthraquinone-tethered DNA with dual triplex forming sites. Long-range photooxidation experiments showed that hole transport was effectively suppressed by the formation of triplex at low temperature, while it was recovered by dissociation to the duplex at higher temperature. Variation of temperature induced the formation and dissociation of the third strand at each triplex region individually, leading to the stepwise regulation of hole transport in DNA.

MeSH terms

  • DNA / chemistry*
  • DNA / genetics
  • Molecular Dynamics Simulation
  • Nucleic Acid Conformation
  • Nucleic Acid Hybridization
  • Oligonucleotides / chemistry*
  • Oligonucleotides / genetics
  • Photosensitivity Disorders

Substances

  • Oligonucleotides
  • triplex DNA
  • DNA