Genomic organization of the mouse T cell receptor V alpha family

EMBO J. 1990 Jul;9(7):2141-50. doi: 10.1002/j.1460-2075.1990.tb07383.x.

Abstract

Based on the analysis of V alpha gene segment deletions in a panel of T lymphomas, we have constructed a map of the mouse T cell receptor alpha/delta region and assigned the relative position of 72 distinct V gene segments. Three major observations have emerged from such studies. First, members of a given V alpha subfamily are not organized in discrete units along the chromosome but largely interspersed with members of other V alpha subfamilies. Second, analysis of the deletion map suggests the existence of repetitive patterns (V alpha clusters) in the chromosomal distribution of the V alpha gene segments. Third, the present-day organization of the V alpha/delta region may be readily explained by a series of sequential duplications involving three ancestral V alpha clusters. Direct evidence for the existence of these unique structural features has been gained by cloning approximately 370 kb of DNA and positioning 26 distinct V alpha gene segments belonging to six different subfamilies. Finally, the relationships existing between the V alpha/delta gene segment organization and usage are discussed in terms of position-dependent models.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Blotting, Southern
  • Cell Line
  • Chromosome Deletion
  • Chromosome Mapping
  • DNA, Neoplasm / genetics
  • DNA, Neoplasm / isolation & purification
  • Gene Rearrangement, T-Lymphocyte
  • Lymphoma / immunology
  • Mice
  • Multigene Family*
  • Receptors, Antigen, T-Cell / genetics*
  • Repetitive Sequences, Nucleic Acid
  • Restriction Mapping
  • T-Lymphocytes / immunology

Substances

  • DNA, Neoplasm
  • Receptors, Antigen, T-Cell