Potent and selective HDAC6 inhibitory activity of N-(4-hydroxycarbamoylbenzyl)-1,2,4,9-tetrahydro-3-thia-9-azafluorenes as novel sulfur analogues of Tubastatin A

Chem Commun (Camb). 2013 May 8;49(36):3775-7. doi: 10.1039/c3cc41422a. Epub 2013 Mar 28.

Abstract

Eight N-(4-hydroxycarbamoylbenzyl)-1,2,4,9-tetrahydro-3-thia-9-azafluorenes were efficiently prepared as sulfur analogues of Tubastatin A and thus evaluated as new HDAC6 inhibitors. All compounds exhibited potency against HDAC6, and four of them were active in the nanomolar range (IC(50) = 1.9-22 nM). Further analysis revealed that the sulfone derivatives (designated as Tubathians) are superior to their non-oxidized sulfide analogues, and the two most active sulfones showed good to excellent HDAC6 selectivity compared to all other HDAC isoform classes.

MeSH terms

  • Aza Compounds / chemistry
  • Binding Sites
  • Catalytic Domain
  • Fluorenes / chemistry*
  • Histone Deacetylase Inhibitors / chemistry*
  • Histone Deacetylase Inhibitors / metabolism
  • Histone Deacetylases / chemistry*
  • Histone Deacetylases / metabolism
  • Hydroxamic Acids / chemistry*
  • Hydroxamic Acids / metabolism
  • Indoles / chemistry*
  • Indoles / metabolism
  • Molecular Docking Simulation
  • Protein Binding
  • Sulfones / chemistry

Substances

  • Aza Compounds
  • Fluorenes
  • Histone Deacetylase Inhibitors
  • Hydroxamic Acids
  • Indoles
  • Sulfones
  • tubastatin A
  • Histone Deacetylases