A single-step mixing cloning method for assembly of lentiviral short hairpin RNA expression vectors for gene silencing

Anal Biochem. 2013 Jul 1;438(1):39-41. doi: 10.1016/j.ab.2013.03.011. Epub 2013 Mar 20.

Abstract

Lentiviral expression vectors encoding short hairpin RNA (shRNA) are widely used for RNAi-based gene silencing in mammalian cells. However, current methods for the construction of shRNA expression vectors require multiple steps, which are expensive, time-consuming, and error-prone. Here, we developed a single-step mixing cloning method for the generation of lentiviral shRNA expression vectors. With this method, a pair of short oligonucleotides (∼50 nt) is required and a lentiviral shRNA vector can be constructed with only one step. This method has been used to construct 30 lentiviral shRNA expression vectors successfully.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Cloning, Molecular / methods*
  • Gene Silencing*
  • Genetic Vectors / genetics*
  • Humans
  • Lentivirus / genetics*
  • Nuclear Proteins / deficiency
  • Nuclear Proteins / genetics
  • RNA, Small Interfering / genetics*
  • Repressor Proteins / deficiency
  • Repressor Proteins / genetics

Substances

  • Nuclear Proteins
  • RNA, Small Interfering
  • Repressor Proteins
  • SPOP protein, human