Complete genome sequence of keunjorong mosaic virus, a potyvirus from Cynanchum wilfordii

Arch Virol. 2013 Aug;158(8):1817-20. doi: 10.1007/s00705-013-1652-4. Epub 2013 Mar 17.

Abstract

We have determined the complete genome sequence of keunjorong mosaic virus (KjMV). The KjMV genome is composed of 9,611 nucleotides, excluding the 3'-terminal poly(A) tail. It contains two open reading frames (ORFs), with the large one encoding a polyprotein of 3,070 amino acids and the small overlapping ORF encoding a PIPO protein of 81 amino acids. The KjMV genome shared the highest nucleotide sequence identity (57.5 %) with pepper mottle virus and freesia mosaic virus, two members of the genus Potyvirus. Based on the phylogenetic relatedness to known potyviruses, KjMV appears to be a member of a new species in the genus Potyvirus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cluster Analysis
  • Cynanchum / virology*
  • Genome, Viral*
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Potyvirus / genetics*
  • Potyvirus / isolation & purification
  • RNA, Viral / genetics*
  • Sequence Analysis, DNA*
  • Sequence Homology

Substances

  • RNA, Viral

Associated data

  • GENBANK/JF838187