Association mapping of genetic risk factors for chronic wasting disease in wild deer

Evol Appl. 2013 Feb;6(2):340-52. doi: 10.1111/eva.12003. Epub 2012 Aug 30.

Abstract

Chronic wasting disease (CWD) is a fatal transmissible spongiform encephalopathy affecting North American cervids. We assessed the feasibility of association mapping CWD genetic risk factors in wild white-tailed deer (Odocoileus virginianus) and mule deer (Odocoileus hemionus) using a panel of bovine microsatellite markers from three homologous deer linkage groups predicted to contain candidate genes. These markers had a low cross-species amplification rate (27.9%) and showed weak linkage disequilibrium (<1 cM). Markers near the prion protein and the neurofibromin 1 (NF1) genes were suggestively associated with CWD status in white-tailed deer (P = 0.006) and mule deer (P = 0.02), respectively. This is the first time an association between the NF1 region and CWD has been reported.

Keywords: NF1; PRNP; chronic wasting disease; genetic risk factor; linkage disequilibrium; microsatellite markers; mule deer; white-tailed deer.