Kinetic, energetic, and mechanical differences between dark-state rhodopsin and opsin

Structure. 2013 Mar 5;21(3):426-37. doi: 10.1016/j.str.2013.01.011. Epub 2013 Feb 21.

Abstract

Rhodopsin, the photoreceptor pigment of the retina, initiates vision upon photon capture by its covalently linked chromophore 11-cis-retinal. In the absence of light, the chromophore serves as an inverse agonist locking the receptor in the inactive dark state. In the absence of chromophore, the apoprotein opsin shows low-level constitutive activity. Toward revealing insight into receptor properties controlled by the chromophore, we applied dynamic single-molecule force spectroscopy to quantify the kinetic, energetic, and mechanical differences between dark-state rhodopsin and opsin in native membranes from the retina of mice. Both rhodopsin and opsin are stabilized by ten structural segments. Compared to dark-state rhodopsin, the structural segments stabilizing opsin showed higher interaction strengths and mechanical rigidities and lower conformational variabilities, lifetimes, and free energies. These changes outline a common mechanism toward activating G-protein-coupled receptors. Additionally, we detected that opsin was more pliable and frequently stabilized alternate structural intermediates.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cell Membrane / chemistry*
  • Cell Membrane / metabolism
  • Darkness
  • Kinetics
  • Mice
  • Mice, Knockout
  • Molecular Dynamics Simulation
  • Molecular Sequence Data
  • Opsins / chemistry*
  • Opsins / metabolism
  • Protein Folding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Retinaldehyde / chemistry*
  • Retinaldehyde / metabolism
  • Rhodopsin / chemistry*
  • Rhodopsin / metabolism
  • Rod Cell Outer Segment / chemistry*
  • Rod Cell Outer Segment / metabolism
  • Thermodynamics
  • cis-trans-Isomerases / deficiency
  • cis-trans-Isomerases / genetics

Substances

  • Opsins
  • Rhodopsin
  • retinoid isomerohydrolase
  • cis-trans-Isomerases
  • Retinaldehyde