Six uranyl phosphonates and sulfonates have been hydrothermally synthesized, namely, (H2tib)[(UO2)3(PO3C6H5)4]·2H2O (UPhP-1), Zn(pi)2(UO2)(PO3C6H5)2 (UPhP-2), Zn(dib)(UO2)(PO3C6H5)2·2H2O (UPhP-3), (HTEA)[(UO2)(5-SP)] (USP-1), (Hdib)2[(UO2)2(OH)(O)(5-SP)] (USP-2), and Zn(phen)3(UO2)2(3-SP)2 (USP-3) (tib = 1,3,5-tri(1H-imidazol-1-yl)benzene, pi = 1-phenyl-1H-imidazole, dib = 1,4-di(1H-imidazol-1-yl)benzene, TEA = triethylamine, phen = 1,10-phenanthroline, 5-SP = 5-sulfoisophthalic acid, and 3-SP = 3-sulfoisophthalic acid). UPhP-1 has been determined to be a layered structure constructed by UO7 pentagonal bipyramids, UO6 octahedra, and phenylphosphonates. Protonated tib plays a role in balancing the negative charge and holding its structure together. UPhP-2 is made up of UO6 octahedra, ZnO2N2 tetrahedra and PO3C tetrahedra in phenylphosphonates, forming a 1D assembly, which is stabilized by chelate phen ligand. Further connection of such chainlike structure via dib yields a 2D layered architecture of UPhP-3. Although sulfonate group possesses similar tetrahedral structure as the phosphonate group, a unidentated coordination mode is only found in this work. UO7 pentagonal bipyramids are linked by 5-SP to form the layered assembly of USP-1. USP-2 also consists of the same sulfonate ligand, but features tetranulear uranyl clusters. Similarly, protonated TEA and dib molecules enable stabilization of their structures, respectively. Formed by dinuclear uranyl cluster and 3-SP ligand, USP-3 appears as a 1D arrangement, in which Zn(phen)3 acts as the counterion to compensate the negative charge. All of these compounds have been characterized by IR and photoluminescent spectroscopy. Their characteristic emissions have been attributed as transition properties of uranyl cations.