Meta-analysis identifies a MECOM gene as a novel predisposing factor of osteoporotic fracture

J Med Genet. 2013 Apr;50(4):212-9. doi: 10.1136/jmedgenet-2012-101156. Epub 2013 Jan 24.

Abstract

Background: Osteoporotic fracture (OF) as a clinical endpoint is a major complication of osteoporosis. To screen for OF susceptibility genes, we performed a genome-wide association study and carried out de novo replication analysis of an East Asian population.

Methods: Association was tested using a logistic regression analysis. A meta-analysis was performed on the combined results using effect size and standard errors estimated for each study.

Results: In a combined meta-analysis of a discovery cohort (288 cases and 1139 controls), three hospital based sets in replication stage I (462 cases and 1745 controls), and an independent ethnic group in replication stage II (369 cases and 560 for controls), we identified a new locus associated with OF (rs784288 in the MECOM gene) that showed genome-wide significance (p=3.59×10(-8); OR 1.39). RNA interference revealed that a MECOM knockdown suppresses osteoclastogenesis.

Conclusions: Our findings provide new insights into the genetic architecture underlying OF in East Asians.

Publication types

  • Meta-Analysis
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Case-Control Studies
  • DNA-Binding Proteins / genetics*
  • Gene Expression Regulation
  • Gene Knockdown Techniques
  • Genetic Predisposition to Disease
  • Genome-Wide Association Study
  • Genotype
  • Humans
  • MDS1 and EVI1 Complex Locus Protein
  • Middle Aged
  • Osteogenesis / genetics
  • Osteoporosis / genetics*
  • Osteoporosis / pathology
  • Osteoporotic Fractures / genetics*
  • Osteoporotic Fractures / pathology
  • Polymorphism, Single Nucleotide
  • Proto-Oncogenes / genetics*
  • Quantitative Trait Loci / genetics*
  • Transcription Factors / genetics*

Substances

  • DNA-Binding Proteins
  • MDS1 and EVI1 Complex Locus Protein
  • MECOM protein, human
  • Transcription Factors