Self-assembly of Arg-Phe nanostructures via the solid-vapor phase method

J Phys Chem B. 2013 Jan 24;117(3):733-40. doi: 10.1021/jp307716y. Epub 2013 Jan 14.

Abstract

We report for the first time on the self-assembly of nanostructures composed exclusively of alternating positively charged and hydrophobic amino acids. A novel arginine/phenylalanine octapeptide, RF8, was synthesized. Because the low hydrophobicity of this sequence makes its spontaneous ordering through solution-based methods difficult, a recently proposed solid-vapor approach was used to obtain nanometric architectures on ITO/PET substrates. The formation of the nanostructures was investigated under different preparation conditions, specifically, under different gas-phase solvents (aniline, water, and dichloromethane), different peptide concentrations in the precursor solution, and different incubation times. The stability of the assemblies was experimentally studied by electron microscopy and thermogravimetric analysis coupled with mass spectrometry. The secondary structure was assessed by infrared and Raman spectroscopy, and the arrays were found to assume an antiparallel β-sheet conformation. FEG-SEM images clearly reveal the appearance of fibrillar structures that form extensive homogeneously distributed networks. A close relationship between the morphology and preparation parameters was found, and a concentration-triggered mechanism was suggested. Molecular dynamics simulations were performed to address the thermal stability and nature of intermolecular interactions of the putative assembly structure. Results obtained when water is considered as solvent shows that a stable lamellar structure is formed containing a thin layer of water in between the RF8 peptides that is stabilized by H-bonding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Dipeptides / chemistry*
  • Gases / chemistry*
  • Hydrogen Bonding
  • Hydrophobic and Hydrophilic Interactions
  • Molecular Dynamics Simulation
  • Nanostructures / chemistry*
  • Oligopeptides / chemical synthesis
  • Oligopeptides / chemistry
  • Protein Structure, Secondary
  • Solvents / chemistry
  • Temperature
  • Tin Compounds / chemistry

Substances

  • Dipeptides
  • Gases
  • Oligopeptides
  • Solvents
  • Tin Compounds
  • phenylalanylarginine
  • indium tin oxide