Histone deacetylase HDA6 is functionally associated with AS1 in repression of KNOX genes in arabidopsis

PLoS Genet. 2012;8(12):e1003114. doi: 10.1371/journal.pgen.1003114. Epub 2012 Dec 13.

Abstract

ASYMMETRIC LEAVES 1 (AS1) is a MYB-type transcription repressor that controls leaf development by regulating KNOX gene expression, but the underlying molecular mechanism is still unclear. In this study, we demonstrated that AS1 can interact with the histone deacetylase HDA6 in vitro and in vivo. The KNOX genes were up-regulated and hyperacetylated in the hda6 mutant, axe1-5, indicating that HDA6 may regulate KNOX expression through histone deacetylation. Compared with the single mutants, the as1-1/axe1-5 and as2-1/axe1-5 double mutants displayed more severe serrated leaf and short petiole phenotypes. In addition, the frequencies of leaf lobes and leaflet-like structures were also increased in as1-1/axe1-5 and as2-1/axe1-5 double mutants, suggesting that HDA6 acts together with AS1 and AS2 in regulating leaf development. Chromatin immunoprecipitation assays revealed that HDA6 and AS1 bound directly to KNAT1, KNAT2, and KNATM chromatin. Taken together, these data indicate that HDA6 is a part of the AS1 repressor complex to regulate the KNOX expression in leaf development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / genetics
  • Arabidopsis / growth & development
  • Arabidopsis Proteins* / genetics
  • Arabidopsis Proteins* / metabolism
  • Gene Expression Regulation, Plant
  • Histone Deacetylases* / genetics
  • Histone Deacetylases* / metabolism
  • Homeodomain Proteins* / genetics
  • Homeodomain Proteins* / metabolism
  • Mutation
  • Plant Leaves / genetics
  • Plant Leaves / growth & development*
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism

Substances

  • ASYMMETRIC LEAVES1 protein, Arabidopsis
  • Arabidopsis Proteins
  • Homeodomain Proteins
  • Knox1 protein, plant
  • Plant Proteins
  • Transcription Factors
  • HDA6 protein, Arabidopsis
  • Histone Deacetylases

Grants and funding

This study was funded by grants from the National Science Council of Taiwan (101-2311-B-002-012-MY3 and 101-2923-B-002-005-MY3) and National Taiwan University (101R892005). Research in Guangzhou was supported by the National Basic Research Program of China (973 program number 2012CB910900) and grants from the National Natural Science Foundation of China (number 31200965 and number 31128001). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.