QSAR studies of macrocyclic diterpenes with P-glycoprotein inhibitory activity

Eur J Pharm Sci. 2013 Feb 14;48(3):542-53. doi: 10.1016/j.ejps.2012.11.012. Epub 2012 Dec 7.

Abstract

Multidrug resistance (MDR) represents a major limitation for cancer chemotherapy. There are several mechanisms of MDR but the most important is associated with P-glycoprotein (P-gp) overexpression. The development of modulators of P-gp that are able to re-establish drug sensitivity of resistant cells has been considered a promising approach for overcoming MDR. Macrocyclic lathyrane and jatrophane-type diterpenes from Euphorbia species were found to be strong MDR reversing agents. In this study we applied quantitative structure-activity relationship (QSAR) methodology in order to identify the most relevant molecular features of macrocyclic diterpenes with P-gp inhibitory activity and to determine which structural modifications can be performed to improve their activity. Using experimental biological data at two concentrations (4 and 40 μg/ml), we developed a QSAR model for a set of 51 bioactive diterpenic compounds which includes lathyrane and jatrophane-type diterpenes and another model just for jatrophanes. The cross-validation correlation values for all diterpenes QSAR models developed for biological activities at compound concentrations of 4 and 40 μg/ml were 0.758 and 0.729, respectively. Regarding the prediction ability, we get R²(pred) values of 0.765 and 0.534 for biological activities at compound concentrations of 4 and 40 μg/ml, respectively. Applying the cross-validation test to jatrophanes QSAR models, we obtained 0.680 and 0.787 for biological activities at compound concentrations of 4 and 40 μg/ml concentrations, respectively. For the same concentrations, the obtained R²(pred) values for jatrophanes models were 0.541 and 0.534, respectively. The obtained models were statistically valid and showed high prediction ability.

Publication types

  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • ATP Binding Cassette Transporter, Subfamily B / antagonists & inhibitors
  • ATP Binding Cassette Transporter, Subfamily B / chemistry
  • ATP Binding Cassette Transporter, Subfamily B / genetics
  • ATP Binding Cassette Transporter, Subfamily B / metabolism
  • Animals
  • Antineoplastic Agents, Phytogenic / chemistry
  • Antineoplastic Agents, Phytogenic / pharmacology
  • Artificial Intelligence
  • Biological Transport / drug effects
  • Cell Line, Tumor
  • Diterpenes / chemistry*
  • Diterpenes / pharmacology
  • Drug Resistance, Multiple
  • Drug Resistance, Neoplasm
  • Fluorescent Dyes / metabolism
  • Humans
  • Macrocyclic Compounds / chemistry*
  • Macrocyclic Compounds / pharmacology
  • Mice
  • Models, Molecular*
  • Molecular Conformation
  • Neoplasm Proteins / antagonists & inhibitors
  • Neoplasm Proteins / chemistry
  • Neoplasm Proteins / genetics
  • Neoplasm Proteins / metabolism
  • Osmolar Concentration
  • Quantitative Structure-Activity Relationship
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Rhodamine 123 / metabolism

Substances

  • ABCB1 protein, human
  • ATP Binding Cassette Transporter, Subfamily B
  • Antineoplastic Agents, Phytogenic
  • Diterpenes
  • Fluorescent Dyes
  • Macrocyclic Compounds
  • Neoplasm Proteins
  • Recombinant Proteins
  • jatrophane
  • lathyrane
  • Rhodamine 123