Identification of the promoter region and genetic mutations of the porcine GALP gene

Mol Biol Rep. 2013 Apr;40(4):2821-7. doi: 10.1007/s11033-012-2297-1. Epub 2012 Dec 9.

Abstract

Galanin-like peptide (GALP) gene, encoding a member of the galanin family of neuropeptides involved in reproduction, was differentially expressed in PMSG-hCG stimulated pre-ovulatory ovarian follicles of Chinese Taihu and Large White sows in our previous study. In the present study, promoter region and genetic mutations of the porcine GALP gene were determined. A 1,322 bp contig in 5'-flanking region was predicted to contain 5 potential transcription promoters by Neural Network Promoter Prediction version 2.2. 5'-deletion expression in both CHO and hela cells showed that there were a negative regulatory element at -852 to -803 bp and a positive regulatory element at -1,318 to -1,269 bp. Comparative sequence analyses of Chinese Taihu and Large White GALP gene sequence revealed the c.*27C>G mutation in the 3'-UTR and the c.88-1225C>G mutation in intron 1, which can be detected by HhaI and AluI PCR-RFLP, respectively. The association analysis with litter size traits showed that at both loci CC and GG genotypes were different for NBA for all parities in DIV pigs (P < 0.05). However, two SNPs were not in significant linkage disequilibrium analyzed using SHEsis online software, and could be used in pig breeding individually.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Galanin-Like Peptide / genetics*
  • Genetic Association Studies
  • Litter Size / genetics*
  • Mutation
  • Promoter Regions, Genetic*
  • Quantitative Trait Loci
  • Swine / genetics*

Substances

  • Galanin-Like Peptide