2D difference gel electrophoresis reference map of a Fusarium graminearum nivalenol producing strain

Electrophoresis. 2013 Feb;34(4):505-9. doi: 10.1002/elps.201200256. Epub 2013 Jan 22.

Abstract

Fusarium graminearum is widely studied as a model for toxin production among plant pathogenic fungi. A 2D DIGE reference map for the nivalenol-producing strain 453 was established. Based on a whole protein extract, all reproducible spots were systematically picked and analyzed by MALDI-TOF/TOF, leading to the identification of 1102 protein species. The obtained map contributes to the annotation of the genome by identifying previously nondescribed hypothetical proteins and will serve as a reference for future studies aiming at deciphering F. graminearum biology and chemotype diversity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Databases, Protein
  • Electrophoresis, Gel, Two-Dimensional / methods*
  • Fungal Proteins / analysis*
  • Fungal Proteins / chemistry*
  • Fusarium / chemistry
  • Fusarium / genetics
  • Fusarium / metabolism*
  • Proteome / analysis*
  • Proteome / chemistry*
  • Reproducibility of Results
  • Trichothecenes / biosynthesis*

Substances

  • Fungal Proteins
  • Proteome
  • Trichothecenes
  • nivalenol