Azurin as a protein scaffold for a low-coordinate nonheme iron site with a small-molecule binding pocket

J Am Chem Soc. 2012 Dec 5;134(48):19746-57. doi: 10.1021/ja308346b. Epub 2012 Nov 20.

Abstract

The apoprotein of Pseudomonas aeruginosa azurin binds iron(II) to give a 1:1 complex, which has been characterized by electronic absorption, Mössbauer, and NMR spectroscopies, as well as X-ray crystallography and quantum-chemical computations. Despite potential competition by water and other coordinating residues, iron(II) binds tightly to the low-coordinate site. The iron(II) complex does not react with chemical redox agents to undergo oxidation or reduction. Spectroscopically calibrated quantum-chemical computations show that the complex has high-spin iron(II) in a pseudotetrahedral coordination environment, which features interactions with side chains of two histidines and a cysteine as well as the C═O of Gly45. In the (5)A(1) ground state, the d(z(2)) orbital is doubly occupied. Mutation of Met121 to Ala leaves the metal site in a similar environment but creates a pocket for reversible binding of small anions to the iron(II) center. Specifically, azide forms a high-spin iron(II) complex and cyanide forms a low-spin iron(II) complex.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Azides / chemistry
  • Azurin / chemistry*
  • Binding Sites
  • Coordination Complexes / chemistry
  • Crystallography, X-Ray
  • Cyanides / chemistry
  • Iron / chemistry*
  • Magnetic Resonance Spectroscopy
  • Molecular Structure
  • Nonheme Iron Proteins / chemistry*
  • Oxidation-Reduction
  • Quantum Theory*

Substances

  • Azides
  • Coordination Complexes
  • Cyanides
  • Nonheme Iron Proteins
  • Azurin
  • Iron