Noncanonical G recognition mediates KSRP regulation of let-7 biogenesis

Nat Struct Mol Biol. 2012 Dec;19(12):1282-6. doi: 10.1038/nsmb.2427. Epub 2012 Nov 11.

Abstract

Let-7 is an important tumor-suppressive microRNA (miRNA) that acts as an on-off switch for cellular differentiation and regulates the expression of a set of human oncogenes. Binding of the human KSRP protein to let-7 miRNA precursors positively regulates their processing to mature let-7, thereby contributing to control of cell proliferation, apoptosis and differentiation. Here we analyze the molecular basis for KSRP-let-7 precursor selectivity and show how the third KH domain of the protein recognizes a G-rich sequence in the pre-let-7 terminal loop and dominates the interaction. The structure of the KH3-RNA complex explains the protein recognition of this noncanonical KH target sequence, and we demonstrate that the specificity of this binding is crucial for the functional interaction between the protein and the miRNA precursor.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Humans
  • MicroRNAs / biosynthesis*
  • Models, Molecular
  • Nuclear Magnetic Resonance, Biomolecular
  • RNA-Binding Proteins / physiology*
  • Trans-Activators / physiology*

Substances

  • KHSRP protein, human
  • MicroRNAs
  • RNA-Binding Proteins
  • Trans-Activators
  • mirnlet7 microRNA, human

Associated data

  • PDB/4B8T