A spiroligomer α-helix mimic that binds HDM2, penetrates human cells and stabilizes HDM2 in cell culture

PLoS One. 2012;7(10):e45948. doi: 10.1371/journal.pone.0045948. Epub 2012 Oct 18.

Abstract

We demonstrate functionalized spiroligomers that mimic the HDM2-bound conformation of the p53 activation domain. Spiroligomers are stereochemically defined, functionalized, spirocyclic monomers coupled through pairs of amide bonds to create spiro-ladder oligomers. Two series of spiroligomers were synthesized, one of structural analogs and one of stereochemical analogs, from which we identified compound 1, that binds HDM2 with a Kd value of 400 nM. The spiroligomer 1 penetrates human liver cancer cells through passive diffusion and in a dose-dependent and time-dependent manner increases the levels of HDM2 more than 30-fold in Huh7 cells in which the p53/HDM2 negative feed-back loop is inoperative. This is a biological effect that is not seen with the HDM2 ligand nutlin-3a. We propose that compound 1 modulates the levels of HDM2 by stabilizing it to proteolysis, allowing it to accumulate in the absence of a p53/HDM2 feedback loop.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Binding Sites
  • Biological Transport
  • Cell Line, Tumor
  • Diffusion
  • Feedback, Physiological
  • Gene Expression / drug effects
  • Hepatocytes / drug effects*
  • Hepatocytes / metabolism
  • Hepatocytes / pathology
  • Humans
  • Imidazoles / chemistry
  • Imidazoles / metabolism
  • Kinetics
  • Models, Molecular
  • Molecular Conformation
  • Molecular Mimicry
  • Piperazines / chemistry
  • Piperazines / metabolism
  • Protein Binding
  • Protein Stability / drug effects
  • Protein Structure, Tertiary
  • Proto-Oncogene Proteins c-mdm2 / chemistry
  • Proto-Oncogene Proteins c-mdm2 / genetics
  • Proto-Oncogene Proteins c-mdm2 / metabolism*
  • Solid-Phase Synthesis Techniques
  • Spiro Compounds / chemical synthesis*
  • Spiro Compounds / pharmacology*
  • Tumor Suppressor Protein p53 / chemistry*

Substances

  • Imidazoles
  • Piperazines
  • Spiro Compounds
  • Tumor Suppressor Protein p53
  • nutlin 3
  • MDM2 protein, human
  • Proto-Oncogene Proteins c-mdm2