Complete genome sequence of Central Africa human T-cell lymphotropic virus subtype 1b

J Virol. 2012 Nov;86(22):12451. doi: 10.1128/JVI.02258-12.

Abstract

Human T-lymphotropic virus type 1 (HTLV-1) has a global spread, and it is estimated that around 20 million persons are infected. Seven major genetic subtypes are recognized. However, there are complete genomes only from the HTLV-1a (cosmopolitan) and HTLV-1c (Melanesian) subtypes. Here, the first full-length genome of an HTLV-1b strain, a subtype so far restricted to Central African countries, is revealed. The genome size of HTLV-1b SF26, a strain isolated in Brazil, was determined to be 8,267 bp. The genomic analysis showed that all characteristic regions and genes of a prototypic HTLV-1 virus are conserved. This genome can provide information for further studies on the evolutionary history and pathogenic potential of this human oncovirus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Africa, Central
  • DNA, Viral
  • Databases, Genetic
  • Genes, Viral
  • Genome, Viral*
  • Human T-lymphotropic virus 1 / genetics*
  • Humans
  • Molecular Sequence Data
  • Polymerase Chain Reaction / methods
  • Sequence Analysis, DNA

Substances

  • DNA, Viral

Associated data

  • GENBANK/JX507077