Complete genome sequence of a novel reassortant H11N2 avian influenza virus isolated from a live poultry market in eastern China

J Virol. 2012 Nov;86(22):12443. doi: 10.1128/JVI.02236-12.

Abstract

A/chicken/Nanjing/908/2009(H11N2) (CK908) was isolated from a live poultry market in Nanjing, China. Using PCR and sequencing analysis, we obtained the complete genome sequences of the CK908 virus. The sequence analysis demonstrated that this H11N2 virus was a novel reassortant AIV whose PB1, PB2, PA, HA, NP, NA, M, and NS genes originated from H9N2, H7N7, H5N2, H11N8, H3N6, H6N2, H1N1, and H5N1, respectively. Knowledge regarding the complete genome sequences of the CK908 virus will be useful for epidemiological surveillance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA, Viral / genetics
  • Databases, Genetic
  • Genes, Viral
  • Genome, Viral
  • Influenza A virus / genetics*
  • Influenza in Birds / virology
  • Molecular Sequence Data
  • Polymerase Chain Reaction
  • Poultry / virology*
  • Sequence Analysis, DNA

Substances

  • DNA, Viral

Associated data

  • GENBANK/JX499146
  • GENBANK/JX499147
  • GENBANK/JX499148
  • GENBANK/JX499149
  • GENBANK/JX499150
  • GENBANK/JX499151
  • GENBANK/JX499152
  • GENBANK/JX499153